Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Gm43767-201ENSMUST00000198933 381 ntBASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Gm18195-201ENSMUST00000207604 706 ntBASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Gm15590-201ENSMUST00000078419 552 ntBASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trub1Q8C0D0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trub1Q8C0D0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trub1Q8C0D0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trub1Q8C0D0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trub1Q8C0D0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trub1Q8C0D0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Mir5126-201ENSMUST00000175513 77 ntBASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Gm18246-201ENSMUST00000221023 728 ntBASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trub1Q8C0D0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Gm27628-201ENSMUST00000184911 107 ntBASIC15.57■□□□□ 0.08
Trub1Q8C0D0 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trub1Q8C0D0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Gm12350-201ENSMUST00000121208 462 ntBASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms