Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3rf2Q8BZT2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 AA543401-201ENSMUST00000164248 1269 ntBASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Gm7774-201ENSMUST00000200064 533 ntBASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3rf2Q8BZT2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf2Q8BZT2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf2Q8BZT2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Sh3rf2Q8BZT2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf2Q8BZT2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf2Q8BZT2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sh3rf2Q8BZT2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Sh3rf2Q8BZT2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.27■□□□□ 0.03
Sh3rf2Q8BZT2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf2Q8BZT2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf2Q8BZT2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf2Q8BZT2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3rf2Q8BZT2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Sh3rf2Q8BZT2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm22065-201ENSMUST00000103753 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm22066-201ENSMUST00000103761 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm24932-201ENSMUST00000103763 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm24115-201ENSMUST00000103799 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm22190-201ENSMUST00000103827 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm22191-201ENSMUST00000103831 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm24721-201ENSMUST00000103849 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm28018-201ENSMUST00000103869 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm26399-201ENSMUST00000103937 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm24158-201ENSMUST00000175263 71 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm25349-201ENSMUST00000177728 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm23616-201ENSMUST00000177797 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm25871-201ENSMUST00000177816 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm24752-201ENSMUST00000178240 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm24496-201ENSMUST00000178287 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm25649-201ENSMUST00000178476 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm25548-201ENSMUST00000178681 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm23147-201ENSMUST00000178841 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm26095-201ENSMUST00000179270 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm22171-201ENSMUST00000179283 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm23936-201ENSMUST00000179354 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm22619-201ENSMUST00000179516 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm25255-201ENSMUST00000179579 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm24755-201ENSMUST00000179691 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm26506-201ENSMUST00000179692 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm25086-201ENSMUST00000179931 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm23243-201ENSMUST00000180047 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm24659-201ENSMUST00000180212 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm24169-201ENSMUST00000180244 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm23689-201ENSMUST00000180354 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm27359-201ENSMUST00000184153 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm27785-201ENSMUST00000184268 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm27466-201ENSMUST00000184396 110 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Gm27703-201ENSMUST00000184836 110 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms