Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp43Q8BUM9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Gm27300-201ENSMUST00000184085 97 ntBASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Gm27335-201ENSMUST00000184758 97 ntBASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp43Q8BUM9 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp43Q8BUM9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Gm18733-201ENSMUST00000173950 856 ntBASIC15.28■□□□□ 0.04
Usp43Q8BUM9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp43Q8BUM9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.28■□□□□ 0.04
Usp43Q8BUM9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms