Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdk5rap1Q8BTW8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.33□□□□□ -0.11
Cdk5rap1Q8BTW8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Gm9385-201ENSMUST00000117563 472 ntBASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Rprl2-201ENSMUST00000157150 290 ntBASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Cdk5rap1Q8BTW8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Gm14701-201ENSMUST00000117156 348 ntBASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Gm11745-201ENSMUST00000121669 448 ntBASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Gm25925-201ENSMUST00000158314 306 ntBASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Gm8396-201ENSMUST00000057361 823 ntBASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Prob1-201ENSMUST00000097619 3021 ntBASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap1Q8BTW8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap1Q8BTW8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.3□□□□□ -0.12
Cdk5rap1Q8BTW8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Cdk5rap1Q8BTW8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms