Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpne3Q8BT60 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpne3Q8BT60 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne3Q8BT60 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne3Q8BT60 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne3Q8BT60 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne3Q8BT60 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne3Q8BT60 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne3Q8BT60 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne3Q8BT60 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne3Q8BT60 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne3Q8BT60 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cpne3Q8BT60 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne3Q8BT60 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms