Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.22■□□□□ 0.35
Scfd1Q8BRF7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Gm5779-201ENSMUST00000218467 910 ntBASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scfd1Q8BRF7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.34
Scfd1Q8BRF7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.21■□□□□ 0.34
Scfd1Q8BRF7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scfd1Q8BRF7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scfd1Q8BRF7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Gm15693-201ENSMUST00000120470 637 ntBASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Gm9824-201ENSMUST00000178707 561 ntBASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms