Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh20Q8BIZ0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh20Q8BIZ0 Gm8097-201ENSMUST00000117903 829 ntBASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 Gm18733-201ENSMUST00000173950 856 ntBASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh20Q8BIZ0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Gm44771-201ENSMUST00000206975 626 ntBASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Pcdh20Q8BIZ0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh20Q8BIZ0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms