Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Slc5a7Q8BGY9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Slc5a7Q8BGY9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Gm20760-201ENSMUST00000179197 648 ntBASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.23□□□□□ -0.29
Slc5a7Q8BGY9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms