Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim23Q8BGX0 Celf4-206ENSMUST00000224553 1729 ntBASIC14.58□□□□□ -0.07
Trim23Q8BGX0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim23Q8BGX0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trim23Q8BGX0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Trim23Q8BGX0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Gm4995-201ENSMUST00000117247 432 ntBASIC14.58□□□□□ -0.08
Trim23Q8BGX0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Gm25911-201ENSMUST00000157621 56 ntBASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim23Q8BGX0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Gm44492-201ENSMUST00000197012 141 ntBASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Thap2-203ENSMUST00000218989 527 ntBASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim23Q8BGX0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Gm27301-201ENSMUST00000184012 127 ntBASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim23Q8BGX0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Gm16198-201ENSMUST00000118766 670 ntBASIC14.55□□□□□ -0.08
Trim23Q8BGX0 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Gm11594-201ENSMUST00000122313 162 ntBASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Gm37935-201ENSMUST00000192012 982 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms