Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Gm15173-201ENSMUST00000122049 433 ntBASIC17.73■□□□□ 0.43
Samm50Q8BGH2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Gm2651-201ENSMUST00000203560 838 ntBASIC17.73■□□□□ 0.43
Samm50Q8BGH2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Samm50Q8BGH2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Mir5131-201ENSMUST00000175426 93 ntBASIC17.72■□□□□ 0.43
Samm50Q8BGH2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Samm50Q8BGH2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Gm11780-201ENSMUST00000136880 516 ntBASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Samm50Q8BGH2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Samm50Q8BGH2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Samm50Q8BGH2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Samm50Q8BGH2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms