Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4bQ8BGE6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Gm27300-201ENSMUST00000184085 97 ntBASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Gm27335-201ENSMUST00000184758 97 ntBASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Gm18246-201ENSMUST00000221023 728 ntBASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4bQ8BGE6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Atg4bQ8BGE6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms