Protein–RNA interactions for Protein: Q80ZS5

Cldn34b3, Claudin 34B3, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b3Q80ZS5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cldn34b3Q80ZS5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34b3Q80ZS5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Gm18246-201ENSMUST00000221023 728 ntBASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cldn34b3Q80ZS5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cldn34b3Q80ZS5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34b3Q80ZS5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms