Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim62Q80V85 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim62Q80V85 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim62Q80V85 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim62Q80V85 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim62Q80V85 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim62Q80V85 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim62Q80V85 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim62Q80V85 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.61■□□□□ 0.09
Trim62Q80V85 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trim62Q80V85 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.61■□□□□ 0.09
Trim62Q80V85 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.61■□□□□ 0.09
Trim62Q80V85 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim62Q80V85 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim62Q80V85 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trim62Q80V85 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim62Q80V85 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim62Q80V85 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trim62Q80V85 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim62Q80V85 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim62Q80V85 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim62Q80V85 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.6■□□□□ 0.09
Trim62Q80V85 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim62Q80V85 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim62Q80V85 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim62Q80V85 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim62Q80V85 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim62Q80V85 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim62Q80V85 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.6■□□□□ 0.09
Trim62Q80V85 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Trim62Q80V85 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim62Q80V85 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.6■□□□□ 0.09
Trim62Q80V85 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim62Q80V85 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim62Q80V85 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.6■□□□□ 0.09
Trim62Q80V85 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim62Q80V85 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim62Q80V85 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim62Q80V85 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim62Q80V85 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim62Q80V85 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim62Q80V85 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.59■□□□□ 0.09
Trim62Q80V85 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trim62Q80V85 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.59■□□□□ 0.09
Trim62Q80V85 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.59■□□□□ 0.09
Trim62Q80V85 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.59■□□□□ 0.09
Trim62Q80V85 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.59■□□□□ 0.09
Trim62Q80V85 Gm10154-201ENSMUST00000084445 354 ntBASIC15.59■□□□□ 0.09
Trim62Q80V85 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.59■□□□□ 0.09
Trim62Q80V85 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim62Q80V85 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim62Q80V85 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
Trim62Q80V85 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim62Q80V85 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim62Q80V85 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trim62Q80V85 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trim62Q80V85 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trim62Q80V85 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim62Q80V85 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim62Q80V85 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim62Q80V85 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trim62Q80V85 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.58■□□□□ 0.08
Trim62Q80V85 Gm2213-201ENSMUST00000197485 688 ntBASIC15.58■□□□□ 0.08
Trim62Q80V85 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.58■□□□□ 0.08
Trim62Q80V85 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.58■□□□□ 0.08
Trim62Q80V85 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.58■□□□□ 0.08
Trim62Q80V85 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trim62Q80V85 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms