Protein–RNA interactions for Protein: Q80UJ7

Rab3gap1, Rab3 GTPase-activating protein catalytic subunit, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3gap1Q80UJ7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Auts2-212ENSMUST00000178555 309 ntBASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3gap1Q80UJ7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rab3gap1Q80UJ7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Rab3gap1Q80UJ7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.33■□□□□ 0.53
Rab3gap1Q80UJ7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rab3gap1Q80UJ7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rab3gap1Q80UJ7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rab3gap1Q80UJ7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rab3gap1Q80UJ7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rab3gap1Q80UJ7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Gm13616-201ENSMUST00000120600 222 ntBASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Gm43125-201ENSMUST00000201724 730 ntBASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3gap1Q80UJ7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Gm10576-201ENSMUST00000191927 825 ntBASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Gm18057-201ENSMUST00000208220 503 ntBASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Rab3gap1Q80UJ7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3gap1Q80UJ7 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms