Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm45747-201ENSMUST00000212203 999 ntBASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh8Q7TSK3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Gm10499-201ENSMUST00000174094 934 ntBASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Gm27494-201ENSMUST00000184735 189 ntBASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Thap2-203ENSMUST00000218989 527 ntBASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh8Q7TSK3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Gm15427-201ENSMUST00000117288 531 ntBASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh8Q7TSK3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Gm12008-201ENSMUST00000117791 755 ntBASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms