Protein–RNA interactions for Protein: Q78PY7

Snd1, Staphylococcal nuclease domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snd1Q78PY7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Snd1Q78PY7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.5■□□□□ 0.23
Snd1Q78PY7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Snd1Q78PY7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Snd1Q78PY7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Snd1Q78PY7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Snd1Q78PY7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Snd1Q78PY7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Snd1Q78PY7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Snd1Q78PY7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.5■□□□□ 0.23
Snd1Q78PY7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Snd1Q78PY7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Snd1Q78PY7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Snd1Q78PY7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Snd1Q78PY7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Snd1Q78PY7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Snd1Q78PY7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.49■□□□□ 0.23
Snd1Q78PY7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.49■□□□□ 0.23
Snd1Q78PY7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.49■□□□□ 0.23
Snd1Q78PY7 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.49■□□□□ 0.23
Snd1Q78PY7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Snd1Q78PY7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.48■□□□□ 0.23
Snd1Q78PY7 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.48■□□□□ 0.23
Snd1Q78PY7 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.48■□□□□ 0.23
Snd1Q78PY7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Snd1Q78PY7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.47■□□□□ 0.23
Snd1Q78PY7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Snd1Q78PY7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.47■□□□□ 0.23
Snd1Q78PY7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Snd1Q78PY7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snd1Q78PY7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snd1Q78PY7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Snd1Q78PY7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.46■□□□□ 0.23
Snd1Q78PY7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snd1Q78PY7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snd1Q78PY7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snd1Q78PY7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.46■□□□□ 0.23
Snd1Q78PY7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Snd1Q78PY7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snd1Q78PY7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snd1Q78PY7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snd1Q78PY7 Gm12895-201ENSMUST00000122214 226 ntBASIC16.46■□□□□ 0.23
Snd1Q78PY7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms