Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cspg5Q71M36 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.66■□□□□ 0.1
Cspg5Q71M36 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.66■□□□□ 0.1
Cspg5Q71M36 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.66■□□□□ 0.1
Cspg5Q71M36 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.66■□□□□ 0.1
Cspg5Q71M36 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.66■□□□□ 0.1
Cspg5Q71M36 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Gm25948-201ENSMUST00000175334 112 ntBASIC15.66■□□□□ 0.1
Cspg5Q71M36 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Gm45747-201ENSMUST00000212203 999 ntBASIC15.66■□□□□ 0.1
Cspg5Q71M36 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cspg5Q71M36 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.65■□□□□ 0.1
Cspg5Q71M36 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.65■□□□□ 0.1
Cspg5Q71M36 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Gm15358-201ENSMUST00000119249 520 ntBASIC15.65■□□□□ 0.1
Cspg5Q71M36 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg5Q71M36 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms