Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Gm16476-201ENSMUST00000221544 139 ntBASIC17.6■□□□□ 0.41
Nup98Q6PFD9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Gm29667-201ENSMUST00000190817 490 ntBASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 BC001981-202ENSMUST00000191393 1545 ntBASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup98Q6PFD9 Gm7488-201ENSMUST00000117148 684 ntBASIC17.58■□□□□ 0.41
Nup98Q6PFD9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup98Q6PFD9 Gm4875-201ENSMUST00000118257 786 ntBASIC17.58■□□□□ 0.41
Nup98Q6PFD9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.58■□□□□ 0.41
Nup98Q6PFD9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
Nup98Q6PFD9 Gm3436-201ENSMUST00000179930 840 ntBASIC17.58■□□□□ 0.41
Nup98Q6PFD9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup98Q6PFD9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup98Q6PFD9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup98Q6PFD9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup98Q6PFD9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup98Q6PFD9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Nup98Q6PFD9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.58■□□□□ 0.4
Nup98Q6PFD9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Nup98Q6PFD9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup98Q6PFD9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms