Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abcf1Q6P542 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.94■□□□□ 0.3
Abcf1Q6P542 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.94■□□□□ 0.3
Abcf1Q6P542 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.94■□□□□ 0.3
Abcf1Q6P542 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.93■□□□□ 0.3
Abcf1Q6P542 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abcf1Q6P542 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Gm28659-201ENSMUST00000188013 759 ntBASIC16.92■□□□□ 0.3
Abcf1Q6P542 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.92■□□□□ 0.3
Abcf1Q6P542 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abcf1Q6P542 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Gm14722-201ENSMUST00000118943 689 ntBASIC16.91■□□□□ 0.3
Abcf1Q6P542 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Gm25745-201ENSMUST00000174945 133 ntBASIC16.91■□□□□ 0.3
Abcf1Q6P542 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abcf1Q6P542 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abcf1Q6P542 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms