Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sp140Q6NSQ5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sp140Q6NSQ5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sp140Q6NSQ5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sp140Q6NSQ5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sp140Q6NSQ5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sp140Q6NSQ5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sp140Q6NSQ5 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sp140Q6NSQ5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sp140Q6NSQ5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sp140Q6NSQ5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Sp140Q6NSQ5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.33■□□□□ 0.05
Sp140Q6NSQ5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sp140Q6NSQ5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Gm7862-201ENSMUST00000121461 292 ntBASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Gm7230-201ENSMUST00000173026 815 ntBASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sp140Q6NSQ5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Gm7153-201ENSMUST00000117092 455 ntBASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Gm7222-201ENSMUST00000117512 906 ntBASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp140Q6NSQ5 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Gm6550-201ENSMUST00000187574 993 ntBASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms