Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Gm18101-201ENSMUST00000215769 548 ntBASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Gm21559-201ENSMUST00000220638 855 ntBASIC15.53■□□□□ 0.08
Krt42Q6IFX2 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Gm8587-201ENSMUST00000076538 843 ntBASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Krt42Q6IFX2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Krt42Q6IFX2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Krt42Q6IFX2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Krt42Q6IFX2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Krt42Q6IFX2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Krt42Q6IFX2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Krt42Q6IFX2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Krt42Q6IFX2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Gm45058-201ENSMUST00000205810 766 ntBASIC15.5■□□□□ 0.07
Krt42Q6IFX2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Krt42Q6IFX2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms