Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Scn9aQ62205 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn9aQ62205 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Scn9aQ62205 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.55■□□□□ 0.4
Scn9aQ62205 Gm13464-201ENSMUST00000119418 935 ntBASIC17.55■□□□□ 0.4
Scn9aQ62205 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.55■□□□□ 0.4
Scn9aQ62205 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.55■□□□□ 0.4
Scn9aQ62205 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Scn9aQ62205 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
Scn9aQ62205 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 Mir6392-201ENSMUST00000184924 108 ntBASIC17.55■□□□□ 0.4
Scn9aQ62205 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.55■□□□□ 0.4
Scn9aQ62205 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Scn9aQ62205 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn9aQ62205 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Scn9aQ62205 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Gm11425-201ENSMUST00000119608 498 ntBASIC17.54■□□□□ 0.4
Scn9aQ62205 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Scn9aQ62205 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.54■□□□□ 0.4
Scn9aQ62205 Gm9396-201ENSMUST00000076703 567 ntBASIC17.54■□□□□ 0.4
Scn9aQ62205 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Scn9aQ62205 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn9aQ62205 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Scn9aQ62205 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn9aQ62205 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC17.53■□□□□ 0.4
Scn9aQ62205 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.53■□□□□ 0.4
Scn9aQ62205 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn9aQ62205 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scn9aQ62205 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scn9aQ62205 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn9aQ62205 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn9aQ62205 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn9aQ62205 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn9aQ62205 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scn9aQ62205 Gm9002-201ENSMUST00000178437 499 ntBASIC17.53■□□□□ 0.4
Scn9aQ62205 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn9aQ62205 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Scn9aQ62205 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scn9aQ62205 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scn9aQ62205 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn9aQ62205 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn9aQ62205 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn9aQ62205 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn9aQ62205 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn9aQ62205 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn9aQ62205 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn9aQ62205 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn9aQ62205 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn9aQ62205 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.52■□□□□ 0.4
Scn9aQ62205 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn9aQ62205 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn9aQ62205 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn9aQ62205 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn9aQ62205 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn9aQ62205 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn9aQ62205 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.52■□□□□ 0.4
Scn9aQ62205 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Scn9aQ62205 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn9aQ62205 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn9aQ62205 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn9aQ62205 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn9aQ62205 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms