Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.79■□□□□ 0.44
Ctr9Q62018 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.79■□□□□ 0.44
Ctr9Q62018 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctr9Q62018 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctr9Q62018 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ctr9Q62018 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctr9Q62018 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctr9Q62018 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ctr9Q62018 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctr9Q62018 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ctr9Q62018 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.79■□□□□ 0.44
Ctr9Q62018 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctr9Q62018 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Ctr9Q62018 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.78■□□□□ 0.44
Ctr9Q62018 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.78■□□□□ 0.44
Ctr9Q62018 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.78■□□□□ 0.44
Ctr9Q62018 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.78■□□□□ 0.44
Ctr9Q62018 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.78■□□□□ 0.44
Ctr9Q62018 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctr9Q62018 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctr9Q62018 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctr9Q62018 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctr9Q62018 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctr9Q62018 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.77■□□□□ 0.44
Ctr9Q62018 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctr9Q62018 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Ctr9Q62018 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctr9Q62018 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctr9Q62018 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.77■□□□□ 0.44
Ctr9Q62018 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctr9Q62018 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.77■□□□□ 0.44
Ctr9Q62018 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.77■□□□□ 0.44
Ctr9Q62018 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.77■□□□□ 0.44
Ctr9Q62018 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctr9Q62018 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.77■□□□□ 0.44
Ctr9Q62018 Gm10154-201ENSMUST00000084445 354 ntBASIC17.77■□□□□ 0.44
Ctr9Q62018 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctr9Q62018 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctr9Q62018 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Ctr9Q62018 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.77■□□□□ 0.43
Ctr9Q62018 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ctr9Q62018 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Ctr9Q62018 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ctr9Q62018 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ctr9Q62018 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ctr9Q62018 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ctr9Q62018 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctr9Q62018 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctr9Q62018 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctr9Q62018 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ctr9Q62018 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ctr9Q62018 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctr9Q62018 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.76■□□□□ 0.43
Ctr9Q62018 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ctr9Q62018 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctr9Q62018 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctr9Q62018 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctr9Q62018 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ctr9Q62018 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctr9Q62018 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctr9Q62018 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ctr9Q62018 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.75■□□□□ 0.43
Ctr9Q62018 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.75■□□□□ 0.43
Ctr9Q62018 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
Ctr9Q62018 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ctr9Q62018 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ctr9Q62018 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ctr9Q62018 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ctr9Q62018 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.75■□□□□ 0.43
Ctr9Q62018 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ctr9Q62018 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.75■□□□□ 0.43
Ctr9Q62018 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ctr9Q62018 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ctr9Q62018 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ctr9Q62018 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ctr9Q62018 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.75■□□□□ 0.43
Ctr9Q62018 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ctr9Q62018 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ctr9Q62018 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Ctr9Q62018 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.74■□□□□ 0.43
Ctr9Q62018 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ctr9Q62018 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.74■□□□□ 0.43
Ctr9Q62018 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.74■□□□□ 0.43
Ctr9Q62018 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms