Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ift88Q61371 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ift88Q61371 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.74■□□□□ 0.27
Ift88Q61371 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Gm13836-201ENSMUST00000121159 501 ntBASIC16.74■□□□□ 0.27
Ift88Q61371 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ift88Q61371 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.74■□□□□ 0.27
Ift88Q61371 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Ift88Q61371 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ift88Q61371 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ift88Q61371 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.73■□□□□ 0.27
Ift88Q61371 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Ift88Q61371 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Ift88Q61371 Mir7071-201ENSMUST00000184847 69 ntBASIC16.73■□□□□ 0.27
Ift88Q61371 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.73■□□□□ 0.27
Ift88Q61371 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.73■□□□□ 0.27
Ift88Q61371 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.73■□□□□ 0.27
Ift88Q61371 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Ift88Q61371 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ift88Q61371 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ift88Q61371 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ift88Q61371 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.72■□□□□ 0.27
Ift88Q61371 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.72■□□□□ 0.27
Ift88Q61371 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.72■□□□□ 0.27
Ift88Q61371 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.72■□□□□ 0.27
Ift88Q61371 Gm8097-201ENSMUST00000117903 829 ntBASIC16.72■□□□□ 0.27
Ift88Q61371 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.72■□□□□ 0.27
Ift88Q61371 Gm7284-201ENSMUST00000131667 944 ntBASIC16.72■□□□□ 0.27
Ift88Q61371 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ift88Q61371 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.72■□□□□ 0.27
Ift88Q61371 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ift88Q61371 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ift88Q61371 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
Ift88Q61371 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.71■□□□□ 0.27
Ift88Q61371 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ift88Q61371 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ift88Q61371 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ift88Q61371 Gm27357-201ENSMUST00000183754 135 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms