Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxd1Q61345 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxd1Q61345 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Foxd1Q61345 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxd1Q61345 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Foxd1Q61345 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxd1Q61345 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Foxd1Q61345 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Foxd1Q61345 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.41■□□□□ 0.38
Foxd1Q61345 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.41■□□□□ 0.38
Foxd1Q61345 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Foxd1Q61345 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxd1Q61345 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxd1Q61345 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Foxd1Q61345 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxd1Q61345 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxd1Q61345 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxd1Q61345 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxd1Q61345 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxd1Q61345 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxd1Q61345 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxd1Q61345 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Foxd1Q61345 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxd1Q61345 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxd1Q61345 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.4■□□□□ 0.38
Foxd1Q61345 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.4■□□□□ 0.38
Foxd1Q61345 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.4■□□□□ 0.38
Foxd1Q61345 Gm10499-201ENSMUST00000174094 934 ntBASIC17.4■□□□□ 0.38
Foxd1Q61345 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Foxd1Q61345 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Foxd1Q61345 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxd1Q61345 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxd1Q61345 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Foxd1Q61345 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxd1Q61345 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Foxd1Q61345 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Foxd1Q61345 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Foxd1Q61345 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxd1Q61345 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Foxd1Q61345 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.39■□□□□ 0.37
Foxd1Q61345 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.39■□□□□ 0.37
Foxd1Q61345 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxd1Q61345 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Foxd1Q61345 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Foxd1Q61345 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Foxd1Q61345 Gm18489-201ENSMUST00000172565 551 ntBASIC17.39■□□□□ 0.37
Foxd1Q61345 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.39■□□□□ 0.37
Foxd1Q61345 Gm20553-201ENSMUST00000204205 844 ntBASIC17.39■□□□□ 0.37
Foxd1Q61345 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Foxd1Q61345 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Foxd1Q61345 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxd1Q61345 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxd1Q61345 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxd1Q61345 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxd1Q61345 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Foxd1Q61345 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxd1Q61345 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxd1Q61345 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxd1Q61345 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxd1Q61345 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxd1Q61345 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxd1Q61345 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxd1Q61345 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxd1Q61345 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Foxd1Q61345 Gm11425-201ENSMUST00000119608 498 ntBASIC17.38■□□□□ 0.37
Foxd1Q61345 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxd1Q61345 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.38■□□□□ 0.37
Foxd1Q61345 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.38■□□□□ 0.37
Foxd1Q61345 Gm18737-201ENSMUST00000173594 937 ntBASIC17.38■□□□□ 0.37
Foxd1Q61345 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Foxd1Q61345 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxd1Q61345 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.38■□□□□ 0.37
Foxd1Q61345 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Foxd1Q61345 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxd1Q61345 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxd1Q61345 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxd1Q61345 Gm9396-201ENSMUST00000076703 567 ntBASIC17.38■□□□□ 0.37
Foxd1Q61345 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Foxd1Q61345 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Foxd1Q61345 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxd1Q61345 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Foxd1Q61345 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxd1Q61345 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Foxd1Q61345 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Foxd1Q61345 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Foxd1Q61345 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxd1Q61345 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.37■□□□□ 0.37
Foxd1Q61345 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxd1Q61345 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.37■□□□□ 0.37
Foxd1Q61345 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxd1Q61345 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Foxd1Q61345 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.37■□□□□ 0.37
Foxd1Q61345 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Foxd1Q61345 Rpph1-201ENSMUST00000175096 319 ntBASIC17.37■□□□□ 0.37
Foxd1Q61345 Gm9824-201ENSMUST00000178707 561 ntBASIC17.37■□□□□ 0.37
Foxd1Q61345 Gm9682-201ENSMUST00000197505 556 ntBASIC17.37■□□□□ 0.37
Foxd1Q61345 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Foxd1Q61345 Gm9908-201ENSMUST00000211534 448 ntBASIC17.37■□□□□ 0.37
Foxd1Q61345 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Foxd1Q61345 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms