Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hif1aQ61221 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hif1aQ61221 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hif1aQ61221 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.29■□□□□ 0.04
Hif1aQ61221 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hif1aQ61221 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.29■□□□□ 0.04
Hif1aQ61221 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.29■□□□□ 0.04
Hif1aQ61221 Gm8344-201ENSMUST00000119813 856 ntBASIC15.29■□□□□ 0.04
Hif1aQ61221 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.29■□□□□ 0.04
Hif1aQ61221 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.29■□□□□ 0.04
Hif1aQ61221 Gm44454-201ENSMUST00000198541 138 ntBASIC15.29■□□□□ 0.04
Hif1aQ61221 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.29■□□□□ 0.04
Hif1aQ61221 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Hif1aQ61221 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.29■□□□□ 0.04
Hif1aQ61221 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Hif1aQ61221 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Hif1aQ61221 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Hif1aQ61221 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hif1aQ61221 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.28■□□□□ 0.04
Hif1aQ61221 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Hif1aQ61221 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Hif1aQ61221 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.28■□□□□ 0.04
Hif1aQ61221 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hif1aQ61221 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.28■□□□□ 0.04
Hif1aQ61221 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.28■□□□□ 0.04
Hif1aQ61221 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.28■□□□□ 0.04
Hif1aQ61221 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.28■□□□□ 0.04
Hif1aQ61221 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.28■□□□□ 0.04
Hif1aQ61221 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Hif1aQ61221 Mir3081-201ENSMUST00000175305 84 ntBASIC15.28■□□□□ 0.04
Hif1aQ61221 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.28■□□□□ 0.04
Hif1aQ61221 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hif1aQ61221 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hif1aQ61221 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.28■□□□□ 0.04
Hif1aQ61221 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hif1aQ61221 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.27■□□□□ 0.04
Hif1aQ61221 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hif1aQ61221 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hif1aQ61221 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Hif1aQ61221 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hif1aQ61221 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.27■□□□□ 0.04
Hif1aQ61221 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Hif1aQ61221 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hif1aQ61221 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.27■□□□□ 0.04
Hif1aQ61221 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Hif1aQ61221 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hif1aQ61221 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Hif1aQ61221 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hif1aQ61221 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hif1aQ61221 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hif1aQ61221 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hif1aQ61221 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hif1aQ61221 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hif1aQ61221 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hif1aQ61221 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Hif1aQ61221 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hif1aQ61221 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hif1aQ61221 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.27■□□□□ 0.03
Hif1aQ61221 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hif1aQ61221 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hif1aQ61221 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.27■□□□□ 0.03
Hif1aQ61221 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Hif1aQ61221 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hif1aQ61221 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms