Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mre11Q61216 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.12■□□□□ 0.49
Mre11Q61216 Gm10252-201ENSMUST00000209541 832 ntBASIC18.12■□□□□ 0.49
Mre11Q61216 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.12■□□□□ 0.49
Mre11Q61216 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mre11Q61216 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mre11Q61216 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mre11Q61216 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mre11Q61216 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mre11Q61216 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mre11Q61216 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mre11Q61216 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Mre11Q61216 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mre11Q61216 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mre11Q61216 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mre11Q61216 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mre11Q61216 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mre11Q61216 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mre11Q61216 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mre11Q61216 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mre11Q61216 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Mre11Q61216 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mre11Q61216 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Mre11Q61216 Gm13474-201ENSMUST00000122466 815 ntBASIC18.11■□□□□ 0.49
Mre11Q61216 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Mre11Q61216 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Mre11Q61216 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Mre11Q61216 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Mre11Q61216 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.11■□□□□ 0.49
Mre11Q61216 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mre11Q61216 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Mre11Q61216 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mre11Q61216 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Mre11Q61216 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mre11Q61216 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Mre11Q61216 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC18.1■□□□□ 0.49
Mre11Q61216 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC18.1■□□□□ 0.49
Mre11Q61216 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.1■□□□□ 0.49
Mre11Q61216 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.1■□□□□ 0.49
Mre11Q61216 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.1■□□□□ 0.49
Mre11Q61216 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Mre11Q61216 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC18.1■□□□□ 0.49
Mre11Q61216 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Mre11Q61216 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Mre11Q61216 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mre11Q61216 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Mre11Q61216 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.09■□□□□ 0.49
Mre11Q61216 Matn2-206ENSMUST00000228570 2798 ntBASIC18.09■□□□□ 0.49
Mre11Q61216 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Mre11Q61216 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Mre11Q61216 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Mre11Q61216 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.09■□□□□ 0.49
Mre11Q61216 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Mre11Q61216 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Mre11Q61216 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.09■□□□□ 0.49
Mre11Q61216 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mre11Q61216 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Mre11Q61216 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Mre11Q61216 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mre11Q61216 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mre11Q61216 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mre11Q61216 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.08■□□□□ 0.48
Mre11Q61216 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms