Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scnn1aQ61180 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scnn1aQ61180 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.3■□□□□ 0.36
Scnn1aQ61180 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Scnn1aQ61180 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.29■□□□□ 0.36
Scnn1aQ61180 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Gm14057-201ENSMUST00000120631 482 ntBASIC17.29■□□□□ 0.36
Scnn1aQ61180 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.29■□□□□ 0.36
Scnn1aQ61180 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.29■□□□□ 0.36
Scnn1aQ61180 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scnn1aQ61180 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms