Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.72□□□□□ -0.05
Col12a1Q60847 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col12a1Q60847 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col12a1Q60847 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col12a1Q60847 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col12a1Q60847 Gm5354-201ENSMUST00000182417 973 ntBASIC14.71□□□□□ -0.05
Col12a1Q60847 Gm27631-201ENSMUST00000184163 466 ntBASIC14.71□□□□□ -0.05
Col12a1Q60847 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col12a1Q60847 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col12a1Q60847 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.71□□□□□ -0.05
Col12a1Q60847 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.71□□□□□ -0.05
Col12a1Q60847 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col12a1Q60847 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col12a1Q60847 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col12a1Q60847 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col12a1Q60847 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col12a1Q60847 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col12a1Q60847 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col12a1Q60847 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.71□□□□□ -0.05
Col12a1Q60847 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col12a1Q60847 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col12a1Q60847 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col12a1Q60847 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.71□□□□□ -0.06
Col12a1Q60847 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col12a1Q60847 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Dancr-204ENSMUST00000132389 2347 ntBASIC14.7□□□□□ -0.06
Col12a1Q60847 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col12a1Q60847 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.7□□□□□ -0.06
Col12a1Q60847 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Col12a1Q60847 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col12a1Q60847 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col12a1Q60847 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.7□□□□□ -0.06
Col12a1Q60847 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col12a1Q60847 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Col12a1Q60847 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col12a1Q60847 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col12a1Q60847 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col12a1Q60847 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col12a1Q60847 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col12a1Q60847 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col12a1Q60847 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col12a1Q60847 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.69□□□□□ -0.06
Col12a1Q60847 Mir7070-201ENSMUST00000183657 86 ntBASIC14.69□□□□□ -0.06
Col12a1Q60847 Mir8109-201ENSMUST00000184375 117 ntBASIC14.69□□□□□ -0.06
Col12a1Q60847 AA619741-201ENSMUST00000195095 646 ntBASIC14.69□□□□□ -0.06
Col12a1Q60847 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col12a1Q60847 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col12a1Q60847 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col12a1Q60847 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col12a1Q60847 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col12a1Q60847 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.69□□□□□ -0.06
Col12a1Q60847 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col12a1Q60847 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.69□□□□□ -0.06
Col12a1Q60847 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col12a1Q60847 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col12a1Q60847 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col12a1Q60847 Gm14723-201ENSMUST00000118686 215 ntBASIC14.69□□□□□ -0.06
Col12a1Q60847 Gm27572-201ENSMUST00000183702 255 ntBASIC14.69□□□□□ -0.06
Col12a1Q60847 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col12a1Q60847 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.69□□□□□ -0.06
Col12a1Q60847 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col12a1Q60847 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col12a1Q60847 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Col12a1Q60847 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col12a1Q60847 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Col12a1Q60847 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.68□□□□□ -0.06
Col12a1Q60847 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col12a1Q60847 Gm27839-201ENSMUST00000184242 106 ntBASIC14.68□□□□□ -0.06
Col12a1Q60847 Gm29127-201ENSMUST00000188304 517 ntBASIC14.68□□□□□ -0.06
Col12a1Q60847 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.68□□□□□ -0.06
Col12a1Q60847 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col12a1Q60847 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col12a1Q60847 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col12a1Q60847 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col12a1Q60847 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col12a1Q60847 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Col12a1Q60847 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col12a1Q60847 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col12a1Q60847 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col12a1Q60847 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col12a1Q60847 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms