Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Gm43566-201ENSMUST00000196851 808 ntBASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.2□□□□□ -0.78
Trav3-1Q5R1I8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-1Q5R1I8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms