Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Gm10052-201ENSMUST00000168019 960 ntBASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Gm7729-201ENSMUST00000050143 801 ntBASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav8d-1Q5R1H8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav8d-1Q5R1H8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms