Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-3Q5R1C3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms