Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Gm37297-201ENSMUST00000192974 2384 ntBASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.3■□□□□ 0.68
Ccdc27Q3V036 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Gm10819-201ENSMUST00000099988 561 ntBASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc27Q3V036 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Gm15165-201ENSMUST00000118140 502 ntBASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc27Q3V036 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC19.28■□□□□ 0.68
Ccdc27Q3V036 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Gm27357-201ENSMUST00000183754 135 ntBASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc27Q3V036 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Gm14859-201ENSMUST00000117752 357 ntBASIC19.27■□□□□ 0.68
Ccdc27Q3V036 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Gm25745-201ENSMUST00000174945 133 ntBASIC19.27■□□□□ 0.68
Ccdc27Q3V036 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Efs-202ENSMUST00000227037 2540 ntBASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc27Q3V036 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Ccdc27Q3V036 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc27Q3V036 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc27Q3V036 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc27Q3V036 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms