Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Mir3081-201ENSMUST00000175305 84 ntBASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shisa3Q3UPR0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Gm9103-201ENSMUST00000119371 405 ntBASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shisa3Q3UPR0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Gm27357-201ENSMUST00000183754 135 ntBASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shisa3Q3UPR0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms