Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nhlrc4Q3UP44 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nhlrc4Q3UP44 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nhlrc4Q3UP44 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.88□□□□□ -0.19
Nhlrc4Q3UP44 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nhlrc4Q3UP44 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nhlrc4Q3UP44 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nhlrc4Q3UP44 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nhlrc4Q3UP44 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Gm12260-201ENSMUST00000122447 411 ntBASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Gm6443-201ENSMUST00000203599 874 ntBASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nhlrc4Q3UP44 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Gm16198-201ENSMUST00000118766 670 ntBASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Gm45747-201ENSMUST00000212203 999 ntBASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.86□□□□□ -0.19
Nhlrc4Q3UP44 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc4Q3UP44 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms