Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 Gm8318-201ENSMUST00000182954 872 ntBASIC16.5■□□□□ 0.23
Cracr2aQ3UP38 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cracr2aQ3UP38 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cracr2aQ3UP38 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.5■□□□□ 0.23
Cracr2aQ3UP38 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cracr2aQ3UP38 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cracr2aQ3UP38 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cracr2aQ3UP38 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cracr2aQ3UP38 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.5■□□□□ 0.23
Cracr2aQ3UP38 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cracr2aQ3UP38 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.5■□□□□ 0.23
Cracr2aQ3UP38 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 App-207ENSMUST00000227737 2827 ntBASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cracr2aQ3UP38 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Gm11779-201ENSMUST00000118541 368 ntBASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cracr2aQ3UP38 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cracr2aQ3UP38 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms