Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Gm2272-201ENSMUST00000194903 582 ntBASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Naf1Q3UMQ8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Gm8396-201ENSMUST00000057361 823 ntBASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Naf1Q3UMQ8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Naf1Q3UMQ8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Naf1Q3UMQ8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Naf1Q3UMQ8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.33■□□□□ 0.05
Naf1Q3UMQ8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Naf1Q3UMQ8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.33■□□□□ 0.05
Naf1Q3UMQ8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Naf1Q3UMQ8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Naf1Q3UMQ8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Gm44335-201ENSMUST00000196879 141 ntBASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Gm44297-201ENSMUST00000198304 141 ntBASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Gm44346-201ENSMUST00000198851 141 ntBASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Gm10154-201ENSMUST00000084445 354 ntBASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Prob1-201ENSMUST00000097619 3021 ntBASIC15.33■□□□□ 0.04
Naf1Q3UMQ8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms