Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Khdc4Q3TCX3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Khdc4Q3TCX3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Khdc4Q3TCX3 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Gm19164-201ENSMUST00000210667 640 ntBASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Khdc4Q3TCX3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms