Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cul4aQ3TCH7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Gm10499-201ENSMUST00000174094 934 ntBASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cul4aQ3TCH7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Gm43767-201ENSMUST00000198933 381 ntBASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cul4aQ3TCH7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.86■□□□□ 0.13
Cul4aQ3TCH7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cul4aQ3TCH7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cul4aQ3TCH7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cul4aQ3TCH7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cul4aQ3TCH7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cul4aQ3TCH7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cul4aQ3TCH7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cul4aQ3TCH7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cul4aQ3TCH7 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cul4aQ3TCH7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cul4aQ3TCH7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms