Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nhej1Q3KNJ2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nhej1Q3KNJ2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nhej1Q3KNJ2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.11■□□□□ 0.17
Nhej1Q3KNJ2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms