Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Gm13312-201ENSMUST00000119631 718 ntBASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ptchd3Q0EEE2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Mir3081-201ENSMUST00000175305 84 ntBASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ptchd3Q0EEE2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Gm12134-201ENSMUST00000122109 520 ntBASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ptchd3Q0EEE2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms