Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.57□□□□□ -0.4
Tff1Q08423 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Tff1Q08423 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Gm8825-201ENSMUST00000182565 998 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Gm4518-201ENSMUST00000182638 718 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tff1Q08423 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Gm6376-201ENSMUST00000209407 580 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Tff1Q08423 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tff1Q08423 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Tff1Q08423 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.57□□□□□ -0.4
Tff1Q08423 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tff1Q08423 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.56□□□□□ -0.4
Tff1Q08423 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tff1Q08423 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tff1Q08423 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.56□□□□□ -0.4
Tff1Q08423 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tff1Q08423 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.56□□□□□ -0.4
Tff1Q08423 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.56□□□□□ -0.4
Tff1Q08423 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Tff1Q08423 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Tff1Q08423 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.56□□□□□ -0.4
Tff1Q08423 Gm8000-201ENSMUST00000188378 592 ntBASIC12.56□□□□□ -0.4
Tff1Q08423 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tff1Q08423 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Tff1Q08423 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.56□□□□□ -0.4
Tff1Q08423 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.56□□□□□ -0.4
Tff1Q08423 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tff1Q08423 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tff1Q08423 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.55□□□□□ -0.4
Tff1Q08423 Gm13312-201ENSMUST00000119631 718 ntBASIC12.55□□□□□ -0.4
Tff1Q08423 Gm1401-201ENSMUST00000122048 772 ntBASIC12.55□□□□□ -0.4
Tff1Q08423 Mir5131-201ENSMUST00000175426 93 ntBASIC12.55□□□□□ -0.4
Tff1Q08423 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.55□□□□□ -0.4
Tff1Q08423 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.55□□□□□ -0.4
Tff1Q08423 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.55□□□□□ -0.4
Tff1Q08423 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms