Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm15460-201ENSMUST00000118147 391 ntBASIC22.9■■□□□ 1.26
Col17a1Q07563 Gm13612-201ENSMUST00000119276 390 ntBASIC22.9■■□□□ 1.26
Col17a1Q07563 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC22.9■■□□□ 1.26
Col17a1Q07563 Gm17376-201ENSMUST00000166016 84 ntBASIC22.9■■□□□ 1.26
Col17a1Q07563 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Col17a1Q07563 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC22.9■■□□□ 1.26
Col17a1Q07563 Gm9368-201ENSMUST00000219348 831 ntBASIC22.9■■□□□ 1.26
Col17a1Q07563 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Col17a1Q07563 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Col17a1Q07563 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Col17a1Q07563 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
Col17a1Q07563 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Col17a1Q07563 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Col17a1Q07563 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Col17a1Q07563 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC22.89■■□□□ 1.25
Col17a1Q07563 AC140406.1-201ENSMUST00000226481 465 ntBASIC22.89■■□□□ 1.25
Col17a1Q07563 Gm43702-201ENSMUST00000198772 2546 ntBASIC22.89■■□□□ 1.25
Col17a1Q07563 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC22.89■■□□□ 1.25
Col17a1Q07563 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Col17a1Q07563 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Col17a1Q07563 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Col17a1Q07563 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Col17a1Q07563 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Col17a1Q07563 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC22.88■■□□□ 1.25
Col17a1Q07563 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Col17a1Q07563 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC22.88■■□□□ 1.25
Col17a1Q07563 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC22.88■■□□□ 1.25
Col17a1Q07563 Gm18935-201ENSMUST00000212692 664 ntBASIC22.88■■□□□ 1.25
Col17a1Q07563 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Col17a1Q07563 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Col17a1Q07563 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Col17a1Q07563 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
Col17a1Q07563 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC22.88■■□□□ 1.25
Col17a1Q07563 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Col17a1Q07563 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Col17a1Q07563 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Col17a1Q07563 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC22.87■■□□□ 1.25
Col17a1Q07563 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 Abhd11os-203ENSMUST00000222613 363 ntBASIC22.87■■□□□ 1.25
Col17a1Q07563 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 Gm12846-201ENSMUST00000120431 1373 ntBASIC22.87■■□□□ 1.25
Col17a1Q07563 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Col17a1Q07563 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col17a1Q07563 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col17a1Q07563 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Col17a1Q07563 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col17a1Q07563 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col17a1Q07563 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col17a1Q07563 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC22.86■■□□□ 1.25
Col17a1Q07563 Gm11841-201ENSMUST00000117060 1963 ntBASIC22.86■■□□□ 1.25
Col17a1Q07563 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col17a1Q07563 Gm45751-201ENSMUST00000210185 1573 ntBASIC22.86■■□□□ 1.25
Col17a1Q07563 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col17a1Q07563 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
Col17a1Q07563 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC22.86■■□□□ 1.25
Col17a1Q07563 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Col17a1Q07563 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Col17a1Q07563 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col17a1Q07563 Selenot-ps-201ENSMUST00000119098 593 ntBASIC22.85■■□□□ 1.25
Col17a1Q07563 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC22.85■■□□□ 1.25
Col17a1Q07563 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC22.85■■□□□ 1.25
Col17a1Q07563 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Col17a1Q07563 Gm42627-201ENSMUST00000197347 224 ntBASIC22.85■■□□□ 1.25
Col17a1Q07563 Gm4971-201ENSMUST00000205991 1108 ntBASIC22.85■■□□□ 1.25
Col17a1Q07563 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Col17a1Q07563 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col17a1Q07563 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col17a1Q07563 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col17a1Q07563 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col17a1Q07563 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Col17a1Q07563 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col17a1Q07563 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col17a1Q07563 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
Col17a1Q07563 Gm11803-201ENSMUST00000119966 444 ntBASIC22.85■■□□□ 1.25
Col17a1Q07563 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Col17a1Q07563 Mir5120-201ENSMUST00000175020 78 ntBASIC22.85■■□□□ 1.25
Col17a1Q07563 Gm27320-201ENSMUST00000184892 109 ntBASIC22.85■■□□□ 1.25
Col17a1Q07563 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Col17a1Q07563 Gm34767-201ENSMUST00000191813 1062 ntBASIC22.85■■□□□ 1.25
Col17a1Q07563 Gm17795-201ENSMUST00000214505 757 ntBASIC22.85■■□□□ 1.25
Col17a1Q07563 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Col17a1Q07563 AC069562.2-201ENSMUST00000224644 2146 ntBASIC22.84■■□□□ 1.25
Col17a1Q07563 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col17a1Q07563 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col17a1Q07563 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Col17a1Q07563 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC22.84■■□□□ 1.25
Col17a1Q07563 Gm3222-201ENSMUST00000071282 990 ntBASIC22.84■■□□□ 1.25
Col17a1Q07563 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms