Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm10175-201ENSMUST00000086013 645 ntBASIC14.85□□□□□ -0.03
Sox4Q06831 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sox4Q06831 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.85□□□□□ -0.03
Sox4Q06831 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox4Q06831 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox4Q06831 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sox4Q06831 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox4Q06831 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox4Q06831 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox4Q06831 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox4Q06831 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sox4Q06831 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sox4Q06831 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox4Q06831 Gm45747-201ENSMUST00000212203 999 ntBASIC14.84□□□□□ -0.03
Sox4Q06831 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.84□□□□□ -0.03
Sox4Q06831 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sox4Q06831 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.84□□□□□ -0.03
Sox4Q06831 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox4Q06831 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox4Q06831 Celf4-206ENSMUST00000224553 1729 ntBASIC14.83□□□□□ -0.03
Sox4Q06831 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.83□□□□□ -0.03
Sox4Q06831 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.83□□□□□ -0.03
Sox4Q06831 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.83□□□□□ -0.03
Sox4Q06831 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox4Q06831 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sox4Q06831 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sox4Q06831 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Sox4Q06831 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.83□□□□□ -0.04
Sox4Q06831 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.83□□□□□ -0.04
Sox4Q06831 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.83□□□□□ -0.04
Sox4Q06831 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.83□□□□□ -0.04
Sox4Q06831 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.83□□□□□ -0.04
Sox4Q06831 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Sox4Q06831 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox4Q06831 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sox4Q06831 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 BC037039-201ENSMUST00000192003 2205 ntBASIC14.82□□□□□ -0.04
Sox4Q06831 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Sox4Q06831 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox4Q06831 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox4Q06831 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox4Q06831 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.82□□□□□ -0.04
Sox4Q06831 Thap2-203ENSMUST00000218989 527 ntBASIC14.82□□□□□ -0.04
Sox4Q06831 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Sox4Q06831 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms