Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col9a1Q05722 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col9a1Q05722 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.76□□□□□ -0.05
Col9a1Q05722 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Col9a1Q05722 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.76□□□□□ -0.05
Col9a1Q05722 Gm42651-201ENSMUST00000199851 1339 ntBASIC14.76□□□□□ -0.05
Col9a1Q05722 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.76□□□□□ -0.05
Col9a1Q05722 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.76□□□□□ -0.05
Col9a1Q05722 Gm15483-201ENSMUST00000120338 456 ntBASIC14.76□□□□□ -0.05
Col9a1Q05722 Gm12134-201ENSMUST00000122109 520 ntBASIC14.76□□□□□ -0.05
Col9a1Q05722 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.76□□□□□ -0.05
Col9a1Q05722 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Col9a1Q05722 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Col9a1Q05722 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.76□□□□□ -0.05
Col9a1Q05722 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.76□□□□□ -0.05
Col9a1Q05722 Gm44608-201ENSMUST00000206827 855 ntBASIC14.76□□□□□ -0.05
Col9a1Q05722 Gm18054-201ENSMUST00000207539 555 ntBASIC14.76□□□□□ -0.05
Col9a1Q05722 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.76□□□□□ -0.05
Col9a1Q05722 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.76□□□□□ -0.05
Col9a1Q05722 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC14.76□□□□□ -0.05
Col9a1Q05722 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.76□□□□□ -0.05
Col9a1Q05722 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.76□□□□□ -0.05
Col9a1Q05722 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col9a1Q05722 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Col9a1Q05722 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.76□□□□□ -0.05
Col9a1Q05722 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col9a1Q05722 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Col9a1Q05722 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col9a1Q05722 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col9a1Q05722 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.75□□□□□ -0.05
Col9a1Q05722 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col9a1Q05722 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.75□□□□□ -0.05
Col9a1Q05722 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col9a1Q05722 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Col9a1Q05722 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Col9a1Q05722 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col9a1Q05722 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Col9a1Q05722 Gm5566-201ENSMUST00000116118 459 ntBASIC14.75□□□□□ -0.05
Col9a1Q05722 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col9a1Q05722 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col9a1Q05722 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col9a1Q05722 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.75□□□□□ -0.05
Col9a1Q05722 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col9a1Q05722 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC14.75□□□□□ -0.05
Col9a1Q05722 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Col9a1Q05722 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col9a1Q05722 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col9a1Q05722 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col9a1Q05722 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col9a1Q05722 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Col9a1Q05722 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.74□□□□□ -0.05
Col9a1Q05722 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Col9a1Q05722 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.74□□□□□ -0.05
Col9a1Q05722 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Col9a1Q05722 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Gm5363-201ENSMUST00000211927 938 ntBASIC14.74□□□□□ -0.05
Col9a1Q05722 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.74□□□□□ -0.05
Col9a1Q05722 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.74□□□□□ -0.05
Col9a1Q05722 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.74□□□□□ -0.05
Col9a1Q05722 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Col9a1Q05722 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a1Q05722 Gm37965-201ENSMUST00000195304 1362 ntBASIC14.73□□□□□ -0.05
Col9a1Q05722 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a1Q05722 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.73□□□□□ -0.05
Col9a1Q05722 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a1Q05722 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms