Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.32□□□□□ -0.12
Apoa1Q00623 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.32□□□□□ -0.12
Apoa1Q00623 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Apoa1Q00623 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.32□□□□□ -0.12
Apoa1Q00623 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Apoa1Q00623 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Apoa1Q00623 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Apoa1Q00623 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Apoa1Q00623 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Apoa1Q00623 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Apoa1Q00623 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.32□□□□□ -0.12
Apoa1Q00623 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Apoa1Q00623 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Apoa1Q00623 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Apoa1Q00623 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Apoa1Q00623 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Apoa1Q00623 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.31□□□□□ -0.12
Apoa1Q00623 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Apoa1Q00623 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Apoa1Q00623 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Apoa1Q00623 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Apoa1Q00623 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Apoa1Q00623 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.31□□□□□ -0.12
Apoa1Q00623 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.31□□□□□ -0.12
Apoa1Q00623 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.31□□□□□ -0.12
Apoa1Q00623 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.31□□□□□ -0.12
Apoa1Q00623 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Apoa1Q00623 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Apoa1Q00623 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Apoa1Q00623 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.31□□□□□ -0.12
Apoa1Q00623 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Apoa1Q00623 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Apoa1Q00623 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Apoa1Q00623 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Apoa1Q00623 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Apoa1Q00623 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Apoa1Q00623 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Apoa1Q00623 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Apoa1Q00623 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Apoa1Q00623 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Apoa1Q00623 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Apoa1Q00623 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Apoa1Q00623 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Apoa1Q00623 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Apoa1Q00623 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Apoa1Q00623 Gm8344-201ENSMUST00000119813 856 ntBASIC14.3□□□□□ -0.12
Apoa1Q00623 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.3□□□□□ -0.12
Apoa1Q00623 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.3□□□□□ -0.12
Apoa1Q00623 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Apoa1Q00623 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Apoa1Q00623 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.3□□□□□ -0.12
Apoa1Q00623 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Apoa1Q00623 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Apoa1Q00623 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Apoa1Q00623 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Apoa1Q00623 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Apoa1Q00623 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Apoa1Q00623 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Apoa1Q00623 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Apoa1Q00623 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Apoa1Q00623 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Apoa1Q00623 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Apoa1Q00623 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Apoa1Q00623 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.3□□□□□ -0.12
Apoa1Q00623 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Apoa1Q00623 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.29□□□□□ -0.12
Apoa1Q00623 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Gm12134-201ENSMUST00000122109 520 ntBASIC14.29□□□□□ -0.12
Apoa1Q00623 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.29□□□□□ -0.12
Apoa1Q00623 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.29□□□□□ -0.12
Apoa1Q00623 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.29□□□□□ -0.12
Apoa1Q00623 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.29□□□□□ -0.12
Apoa1Q00623 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.29□□□□□ -0.12
Apoa1Q00623 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Apoa1Q00623 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Apoa1Q00623 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.28□□□□□ -0.12
Apoa1Q00623 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Apoa1Q00623 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Apoa1Q00623 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Apoa1Q00623 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Apoa1Q00623 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Apoa1Q00623 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Apoa1Q00623 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms