Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm5587-201ENSMUST00000206270 674 ntBASIC12.98□□□□□ -0.33
Smn1P97801 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.98□□□□□ -0.33
Smn1P97801 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.98□□□□□ -0.33
Smn1P97801 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.98□□□□□ -0.33
Smn1P97801 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.98□□□□□ -0.33
Smn1P97801 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.98□□□□□ -0.33
Smn1P97801 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Smn1P97801 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.98□□□□□ -0.33
Smn1P97801 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.98□□□□□ -0.33
Smn1P97801 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smn1P97801 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smn1P97801 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.97□□□□□ -0.33
Smn1P97801 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smn1P97801 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Smn1P97801 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smn1P97801 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smn1P97801 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.97□□□□□ -0.33
Smn1P97801 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Smn1P97801 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smn1P97801 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smn1P97801 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smn1P97801 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Smn1P97801 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Smn1P97801 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.96□□□□□ -0.33
Smn1P97801 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Smn1P97801 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Smn1P97801 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Gm14722-201ENSMUST00000118943 689 ntBASIC12.96□□□□□ -0.33
Smn1P97801 Gm13312-201ENSMUST00000119631 718 ntBASIC12.96□□□□□ -0.33
Smn1P97801 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.96□□□□□ -0.33
Smn1P97801 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.96□□□□□ -0.33
Smn1P97801 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.96□□□□□ -0.33
Smn1P97801 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.96□□□□□ -0.33
Smn1P97801 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.96□□□□□ -0.33
Smn1P97801 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Smn1P97801 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Smn1P97801 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smn1P97801 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smn1P97801 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smn1P97801 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smn1P97801 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smn1P97801 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smn1P97801 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smn1P97801 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smn1P97801 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smn1P97801 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smn1P97801 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Smn1P97801 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Smn1P97801 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.96□□□□□ -0.34
Smn1P97801 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smn1P97801 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms