Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC21.21■□□□□ 0.99
Xrn1P97789 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Xrn1P97789 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC21.21■□□□□ 0.99
Xrn1P97789 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Xrn1P97789 AC123645.1-201ENSMUST00000228469 605 ntBASIC21.21■□□□□ 0.99
Xrn1P97789 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrn1P97789 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrn1P97789 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC21.21■□□□□ 0.99
Xrn1P97789 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Xrn1P97789 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC21.2■□□□□ 0.98
Xrn1P97789 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Xrn1P97789 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Xrn1P97789 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC21.2■□□□□ 0.98
Xrn1P97789 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Xrn1P97789 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Xrn1P97789 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrn1P97789 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Xrn1P97789 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Xrn1P97789 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Xrn1P97789 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Xrn1P97789 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Xrn1P97789 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Xrn1P97789 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Xrn1P97789 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Xrn1P97789 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC21.19■□□□□ 0.98
Xrn1P97789 Gm19220-201ENSMUST00000222682 803 ntBASIC21.19■□□□□ 0.98
Xrn1P97789 AC149294.4-201ENSMUST00000227870 882 ntBASIC21.19■□□□□ 0.98
Xrn1P97789 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Xrn1P97789 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Xrn1P97789 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Xrn1P97789 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Xrn1P97789 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC21.19■□□□□ 0.98
Xrn1P97789 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Xrn1P97789 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Xrn1P97789 Gm45244-201ENSMUST00000211328 2200 ntBASIC21.19■□□□□ 0.98
Xrn1P97789 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Xrn1P97789 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC21.18■□□□□ 0.98
Xrn1P97789 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
Xrn1P97789 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Xrn1P97789 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Xrn1P97789 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Xrn1P97789 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Xrn1P97789 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Xrn1P97789 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Xrn1P97789 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Xrn1P97789 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Xrn1P97789 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Xrn1P97789 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Xrn1P97789 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Xrn1P97789 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Xrn1P97789 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Xrn1P97789 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Xrn1P97789 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Xrn1P97789 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Xrn1P97789 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Xrn1P97789 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Xrn1P97789 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Xrn1P97789 Gm5912-201ENSMUST00000122282 1438 ntBASIC21.17■□□□□ 0.98
Xrn1P97789 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Xrn1P97789 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Xrn1P97789 Gm10275-202ENSMUST00000168697 495 ntBASIC21.17■□□□□ 0.98
Xrn1P97789 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Xrn1P97789 Gm7067-201ENSMUST00000207698 1249 ntBASIC21.17■□□□□ 0.98
Xrn1P97789 Gm9182-201ENSMUST00000217829 639 ntBASIC21.17■□□□□ 0.98
Xrn1P97789 AC166349.1-201ENSMUST00000220866 695 ntBASIC21.17■□□□□ 0.98
Xrn1P97789 Gm10275-201ENSMUST00000092620 635 ntBASIC21.17■□□□□ 0.98
Xrn1P97789 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Xrn1P97789 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Xrn1P97789 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Xrn1P97789 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Xrn1P97789 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Xrn1P97789 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Xrn1P97789 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Xrn1P97789 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Xrn1P97789 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Xrn1P97789 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC21.16■□□□□ 0.98
Xrn1P97789 Gm43630-201ENSMUST00000201550 776 ntBASIC21.16■□□□□ 0.98
Xrn1P97789 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Xrn1P97789 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Xrn1P97789 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Xrn1P97789 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Xrn1P97789 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Xrn1P97789 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Xrn1P97789 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Xrn1P97789 Gm12960-201ENSMUST00000120017 1066 ntBASIC21.15■□□□□ 0.98
Xrn1P97789 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms