Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.82■□□□□ 0.6
Smarcc1P97496 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Gm24694-201ENSMUST00000180054 110 ntBASIC18.82■□□□□ 0.6
Smarcc1P97496 Gm27663-201ENSMUST00000184839 110 ntBASIC18.82■□□□□ 0.6
Smarcc1P97496 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.82■□□□□ 0.6
Smarcc1P97496 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Smarcc1P97496 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.82■□□□□ 0.6
Smarcc1P97496 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Smarcc1P97496 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Smarcc1P97496 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc1P97496 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Gm9719-201ENSMUST00000162765 543 ntBASIC18.81■□□□□ 0.6
Smarcc1P97496 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smarcc1P97496 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.81■□□□□ 0.6
Smarcc1P97496 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
Smarcc1P97496 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Smarcc1P97496 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcc1P97496 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.81■□□□□ 0.6
Smarcc1P97496 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smarcc1P97496 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc1P97496 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.8■□□□□ 0.6
Smarcc1P97496 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc1P97496 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc1P97496 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Smarcc1P97496 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.8■□□□□ 0.6
Smarcc1P97496 Shd-206ENSMUST00000225145 998 ntBASIC18.8■□□□□ 0.6
Smarcc1P97496 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.8■□□□□ 0.6
Smarcc1P97496 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc1P97496 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Smarcc1P97496 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc1P97496 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc1P97496 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc1P97496 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc1P97496 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc1P97496 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc1P97496 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc1P97496 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.8■□□□□ 0.6
Smarcc1P97496 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcc1P97496 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Smarcc1P97496 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc1P97496 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc1P97496 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc1P97496 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc1P97496 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc1P97496 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc1P97496 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc1P97496 Gm5566-201ENSMUST00000116118 459 ntBASIC18.79■□□□□ 0.6
Smarcc1P97496 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.79■□□□□ 0.6
Smarcc1P97496 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc1P97496 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc1P97496 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc1P97496 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc1P97496 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcc1P97496 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smarcc1P97496 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc1P97496 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc1P97496 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Smarcc1P97496 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc1P97496 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.78■□□□□ 0.6
Smarcc1P97496 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.78■□□□□ 0.6
Smarcc1P97496 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.78■□□□□ 0.6
Smarcc1P97496 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc1P97496 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smarcc1P97496 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc1P97496 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc1P97496 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.78■□□□□ 0.6
Smarcc1P97496 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc1P97496 Gm29667-201ENSMUST00000190817 490 ntBASIC18.78■□□□□ 0.6
Smarcc1P97496 Gm43433-201ENSMUST00000196573 481 ntBASIC18.78■□□□□ 0.6
Smarcc1P97496 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.78■□□□□ 0.6
Smarcc1P97496 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc1P97496 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc1P97496 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc1P97496 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.78■□□□□ 0.6
Smarcc1P97496 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc1P97496 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms