Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm8602-201ENSMUST00000184045 607 ntBASIC13.93□□□□□ -0.18
Cacna1aP97445 Gm28631-201ENSMUST00000190740 334 ntBASIC13.93□□□□□ -0.18
Cacna1aP97445 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.93□□□□□ -0.18
Cacna1aP97445 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.93□□□□□ -0.18
Cacna1aP97445 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1aP97445 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.93□□□□□ -0.18
Cacna1aP97445 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.92□□□□□ -0.18
Cacna1aP97445 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cacna1aP97445 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cacna1aP97445 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
Cacna1aP97445 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.92□□□□□ -0.18
Cacna1aP97445 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.92□□□□□ -0.18
Cacna1aP97445 Gm27920-201ENSMUST00000183953 96 ntBASIC13.92□□□□□ -0.18
Cacna1aP97445 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Gm18049-201ENSMUST00000208909 581 ntBASIC13.92□□□□□ -0.18
Cacna1aP97445 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.92□□□□□ -0.18
Cacna1aP97445 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.92□□□□□ -0.18
Cacna1aP97445 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Cacna1aP97445 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cacna1aP97445 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1aP97445 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Gm6266-201ENSMUST00000203844 806 ntBASIC13.91□□□□□ -0.18
Cacna1aP97445 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.91□□□□□ -0.18
Cacna1aP97445 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.91□□□□□ -0.18
Cacna1aP97445 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cacna1aP97445 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.91□□□□□ -0.18
Cacna1aP97445 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.91□□□□□ -0.18
Cacna1aP97445 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cacna1aP97445 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.91□□□□□ -0.18
Cacna1aP97445 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.91□□□□□ -0.18
Cacna1aP97445 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cacna1aP97445 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1aP97445 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cacna1aP97445 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cacna1aP97445 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Mir1247-201ENSMUST00000116706 82 ntBASIC13.9□□□□□ -0.18
Cacna1aP97445 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cacna1aP97445 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cacna1aP97445 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
Cacna1aP97445 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.9□□□□□ -0.18
Cacna1aP97445 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.9□□□□□ -0.18
Cacna1aP97445 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
Cacna1aP97445 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cacna1aP97445 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms